@prefix : . @prefix ro: . @prefix bfo: . @prefix dct: . @prefix iao: . @prefix obi: . @prefix owl: . @prefix rdf: . @prefix xml: . @prefix xsd: . @prefix af-c: . @prefix af-e: . @prefix af-m: . @prefix af-p: . @prefix af-q: . @prefix af-r: . @prefix af-x: . @prefix rdfs: . @prefix skos: . @prefix af-rl: . @prefix af-cur: . @base . rdf:type owl:Ontology ; owl:versionIRI ; owl:imports ; dct:issued "2022-03-30T12:00:00Z"^^xsd:dateTime ; dct:license ; dct:modified "2022-03-30T12:00:00Z"^^xsd:dateTime ; dct:rights , ; dct:title "AFO Bio-Assay Domain Ontology (WD/2022/03)" ; owl:priorVersion ; owl:versionInfo "WD/2022/03" . ################################################################# # Annotation properties ################################################################# ### http://purl.allotrope.org/ontologies/property#AFX_0002796 af-x:AFX_0002796 rdf:type owl:AnnotationProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0002798 af-x:AFX_0002798 rdf:type owl:AnnotationProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0002809 af-x:AFX_0002809 rdf:type owl:AnnotationProperty . ### http://purl.org/dc/terms/source dct:source rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#altLabel skos:altLabel rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#changeNote skos:changeNote rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#definition skos:definition rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#example skos:example rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#note skos:note rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#prefLabel skos:prefLabel rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#scopeNote skos:scopeNote rdf:type owl:AnnotationProperty . ################################################################# # Classes ################################################################# ### http://purl.allotrope.org/ontologies/equipment#AFE_0000031 af-e:AFE_0000031 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000362 ; skos:altLabel "sodium sensor" ; skos:definition "A sodium ion sensor is a metabolite sensor that observes the concentration of a sodium ions within a solution. [Allotrope]" ; skos:prefLabel "sodium ion sensor" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000230 af-e:AFE_0000230 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000362 ; skos:definition "A glutamate sensor is a metabolite sensor that observes the concentration of a glutamate within a solution. [Allotrope]" ; skos:prefLabel "glutamate sensor" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000244 af-e:AFE_0000244 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000362 ; skos:altLabel "calcium sensor" ; skos:definition "A calcium ion sensor is a metabolite sensor that observes the concentration of a calcium ions within a solution. [Allotrope]" ; skos:prefLabel "calcium ion sensor" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000264 af-e:AFE_0000264 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000362 ; skos:definition "A glutamine sensor is a metabolite sensor that observes the concentration of a glutamine within a solution. [Allotrope]" ; skos:prefLabel "glutamine sensor" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000306 af-e:AFE_0000306 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000362 ; skos:definition "A lactate sensor is a metabolite sensor that observes the concentration of a lactate within a solution. [Allotrope]" ; skos:prefLabel "lactate sensor" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000362 af-e:AFE_0000362 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0002145 ; skos:changeNote "2016-02-02 add harmonized property restrictions [OSTHUS]" ; skos:definition "A metabolite sensor is a sensor that observes the concentration of a dissolved metabolite within a solution. [Allotrope]" ; skos:example "glucose sensor, lactate sensor, glutamine sensor, glutamate sensor, sodium ion sensor, potassium ion sensor, ammonia sensor, calcium sensor" ; skos:prefLabel "metabolite sensor" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000477 af-e:AFE_0000477 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000362 ; skos:altLabel "ammonia sensor" ; skos:definition "An ammonium sensor is a metabolite sensor that observes the concentration of a ammonium ions within a solution. [Allotrope]" ; skos:prefLabel "ammonium sensor" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000530 af-e:AFE_0000530 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000354 ; skos:altLabel "metabolite analyser"@en-gb , "metabolite analyzer" , "metabolite module" , "nut met" , "nut met module" , "nutrient metabolite module" , "nutrient module" ; skos:changeNote "2016-02-02 add harmonized property restrictions [OSTHUS]" , "2016-02-25 add en-gb translation [OSTHUS]" ; skos:definition "The metabolite analyzer is used for the analysis of metabolites. [Allotrope]" ; skos:prefLabel "nutrient metabolite analyser"@en-gb , "nutrient metabolite analyzer" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000569 af-e:AFE_0000569 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000362 ; skos:definition "A glucose sensor is a metabolite sensor that observes the concentration of a glucose within a solution. [Allotrope]" ; skos:prefLabel "glucose sensor" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000574 af-e:AFE_0000574 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000354 , [ rdf:type owl:Restriction ; owl:onProperty ro:_0000056 ; owl:someValuesFrom af-p:AFP_0001047 ] ; skos:changeNote "2016-02-02 add harmonized property restrictions [OSTHUS]" , "2016-02-03 Added altLabel [OSTHUS]" , "2016-02-25 fix translation [OSTHUS]" ; skos:definition "A blood gas analyzer is a device that is used for blood gas or cell culture gas and pH measurement. [Allotrope]" ; skos:prefLabel "blood gas analyser"@en-gb , "blood gas analyzer" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000807 af-e:AFE_0000807 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000362 ; skos:altLabel "potassium sensor" ; skos:definition "A potassium ion sensor is a metabolite sensor that observes the concentration of a potassium ions within a solution. [Allotrope]" ; skos:prefLabel "potassium ion sensor" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0001637 af-e:AFE_0001637 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000354 ; skos:altLabel "fortebio" ; skos:changeNote "2015-11-25 add concept [Amgen]" , "2016-02-02 add harmonized property restrictions [OSTHUS]" ; skos:definition "A bio-layer interferometer is a device that allows for measurements using bio-layer interferometry (BLI) which is a label-free technology for measuring biomolecular interactions within the interactome. [Wikipedia]" ; skos:prefLabel "bio-layer interferometer" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0001638 af-e:AFE_0001638 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000354 ; skos:altLabel "BLI biosensor tip" , "biolayer interferometry biosensor tip" ; skos:changeNote "2015-11-25 add concept [Amgen]" , "2016-02-02 add harmonized property restrictions [OSTHUS]" ; skos:definition "A biosensor tip is coated with a layer of immobilized protein. [Wikipedia]" ; skos:prefLabel "biosensor tip" . ### http://purl.allotrope.org/ontologies/process#AFP_0001047 af-p:AFP_0001047 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/process#AFP_0001251 af-p:AFP_0001251 rdf:type owl:Class ; owl:equivalentClass [ owl:intersectionOf ( af-p:AFP_0002680 [ rdf:type owl:Restriction ; owl:onProperty af-x:AFX_0002750 ; owl:someValuesFrom [ owl:intersectionOf ( af-m:AFM_0000099 [ rdf:type owl:Restriction ; owl:onProperty ro:_0000087 ; owl:someValuesFrom af-rl:AFRL_0000127 ] ) ; rdf:type owl:Class ] ] ) ; rdf:type owl:Class ] ; rdfs:subClassOf [ rdf:type owl:Restriction ; owl:onProperty af-x:AFX_0002750 ; owl:someValuesFrom af-m:AFM_0000099 ] ; af-x:AFX_0002798 "true"^^xsd:boolean ; skos:definition "A cell culture analysis is the process of analyzing properties of a cell culture. [Allotrope]" ; skos:prefLabel "cell culture analysis" . ### http://purl.allotrope.org/ontologies/process#AFP_0003631 af-p:AFP_0003631 rdf:type owl:Class ; rdfs:subClassOf af-p:AFP_0003491 ; skos:changeNote "[2018-04-18] added to bioassay domain [OSTHUS]" ; skos:definition "A bioassay is an analytical method to determine concentration or potency of a substance by its effect on living cells or tissues. [Wikipedia]" ; skos:prefLabel "bioassay" . ### http://purl.allotrope.org/ontologies/result#AFR_0000492 af-r:AFR_0000492 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0000207 ; skos:changeNote "2016-02-02 add harmonized property restrictions [OSTHUS]" ; skos:definition "A cell culture analysis result is the result of a measurement for cell culture analysis. [Allotrope]" ; skos:prefLabel "cell culture analysis result" . ### http://purl.allotrope.org/ontologies/result#AFR_0000654 af-r:AFR_0000654 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0000207 ; skos:changeNote "2015-11-25 add concept [Amgen]" ; skos:definition "The result of a label free quantitation measurement. [Allotrope]" ; skos:prefLabel "label-free quantitation measurement result" . ### http://purl.allotrope.org/ontologies/result#AFR_0001143 af-r:AFR_0001143 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0000923 , [ rdf:type owl:Restriction ; owl:onProperty af-x:AFX_0002730 ; owl:someValuesFrom af-rl:AFRL_0000299 ] , [ rdf:type owl:Restriction ; owl:onProperty bfo:_0000050 ; owl:someValuesFrom af-r:AFR_0001144 ] ; skos:changeNote "2018-04-18 Added to bioassay domain [OSTHUS]" ; skos:definition "A bioassay result data is a facet of a document that is about some result of a bioassay. [Allotrope]" ; skos:prefLabel "bioassay result data" . ### http://purl.allotrope.org/ontologies/result#AFR_0001144 af-r:AFR_0001144 rdf:type owl:Class ; owl:equivalentClass [ owl:intersectionOf ( af-r:AFR_0000207 [ rdf:type owl:Restriction ; owl:onProperty af-x:AFX_0002734 ; owl:someValuesFrom af-p:AFP_0003631 ] ) ; rdf:type owl:Class ] ; af-x:AFX_0002798 "true"^^xsd:boolean ; skos:changeNote "2018-04-18 Added to bioassay domain [OSTHUS]" ; skos:definition "A bioassay result is an assay result that results from a bioassay. [Allotrope]" ; skos:prefLabel "bioassay result" . ################################################################# # Individuals ################################################################# ### http://purl.allotrope.org/voc/attribution rdf:type owl:NamedIndividual , dct:RightsStatement ; dct:description """ These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations. By using these taxonomies, you agree to the following terms and conditions applicable to its contents: ****************************************************************************** Copyright Notice and Terms for IUPAC Gold Book ______________________________________________________________________________ Copyright © 1998, Regents of the University of California All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 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Copyright © 2015-2022 Allotrope Foundation """ ; dct:title "Creative Commons Attribution 4.0 International Public License" . ### Generated by the OWL API (version 5.1.19) https://github.com/owlcs/owlapi/