@prefix cl: . @prefix go: . @prefix ro: . @prefix bfo: . @prefix dct: . @prefix iao: . @prefix obi: . @prefix owl: . @prefix rdf: . @prefix xml: . @prefix xsd: . @prefix af-c: . @prefix af-e: . @prefix af-m: . @prefix af-p: . @prefix af-q: . @prefix af-r: . @prefix af-x: . @prefix chmo: . @prefix rdfs: . @prefix skos: . @prefix af-cq: . @prefix af-fn: . @prefix af-re: . @prefix af-rl: . @prefix af-cur: . @base . rdf:type owl:Ontology ; owl:versionIRI ; owl:imports ; owl:versionInfo "CR/2019/03"^^xsd:string ; dct:title "AFO Fingerprinting Domain Ontology (CR/2019/03)" ; owl:priorVersion ; dct:rights , ; dct:license ; dct:modified "2019-01-25T12:00:00Z"^^xsd:dateTime ; dct:issued "2019-04-01T12:00:00Z"^^xsd:dateTime ; dct:rightsHolder . ################################################################# # # Annotation properties # ################################################################# ### http://purl.allotrope.org/ontologies/property#AFX_0002796 af-x:AFX_0002796 rdf:type owl:AnnotationProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0002798 af-x:AFX_0002798 rdf:type owl:AnnotationProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0002809 af-x:AFX_0002809 rdf:type owl:AnnotationProperty . ### http://purl.org/dc/terms/source dct:source rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#altLabel skos:altLabel rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#changeNote skos:changeNote rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#definition skos:definition rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#example skos:example rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#note skos:note rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#prefLabel skos:prefLabel rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#scopeNote skos:scopeNote rdf:type owl:AnnotationProperty . ################################################################# # # Classes # ################################################################# ### http://purl.allotrope.org/ontologies/result#AFR_0001607 af-r:AFR_0001607 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001609 ; skos:definition "The top identified substance is an analysis assay result facet that denotes the substance (class of materials) that has been identified by the analysis and ranked top in some measure of hit quality. [Allotrope]" ; skos:prefLabel "top identified substance" . ### http://purl.allotrope.org/ontologies/result#AFR_0001608 af-r:AFR_0001608 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001609 ; skos:altLabel "HQI" ; skos:definition "The hit quality index is a measure how well the spectrum measured compares against a reference spectra of a search database. [Allotrope]" ; skos:prefLabel "hit quality index" . ### http://purl.allotrope.org/ontologies/result#AFR_0001609 af-r:AFR_0001609 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0000923 , [ rdf:type owl:Restriction ; owl:onProperty af-x:AFX_0002734 ; owl:someValuesFrom af-p:AFP_0002691 ] ; skos:definition "A fingerprinting result facet is a facet that is the result of a fingerprinting process. [Allotrope]" ; skos:prefLabel "fingerprinting result facet" . ### http://purl.allotrope.org/ontologies/result#AFR_0001610 af-r:AFR_0001610 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001505 , [ rdf:type owl:Restriction ; owl:onProperty af-x:AFX_0000553 ; owl:someValuesFrom af-p:AFP_0002691 ] , [ rdf:type owl:Restriction ; owl:onProperty af-x:AFX_0002730 ; owl:someValuesFrom [ owl:intersectionOf ( af-rl:AFRL_0000019 [ rdf:type owl:Restriction ; owl:onProperty bfo:_0000054 ; owl:someValuesFrom af-p:AFP_0002691 ] ) ; rdf:type owl:Class ] ] ; skos:definition "A fingerprinting parameter is a datum that is has a parameter role in some fingerprinting process. [Allotrope]" ; skos:prefLabel "fingerprinting parameter" . ### http://purl.allotrope.org/ontologies/result#AFR_0001611 af-r:AFR_0001611 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001610 ; skos:altLabel "HQI margin" ; skos:definition "The hit quality index margin is a permitted hit quality index margin in either way (+/-) to account for noise and error. [Allotrope]" ; skos:prefLabel "hit quality index margin" . ### http://purl.allotrope.org/ontologies/result#AFR_0001612 af-r:AFR_0001612 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001610 ; skos:altLabel "HQI threshold" ; skos:definition "The hit quality index threshold is a specification of a minimal hit quality index value for accepting positive match of the matched spectrum against the library spectrum. [Allotrope]" ; skos:prefLabel "hit quality index threshold" . ### http://purl.allotrope.org/ontologies/result#AFR_0001613 af-r:AFR_0001613 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001608 , [ rdf:type owl:Restriction ; owl:onProperty af-x:AFX_0002699 ; owl:someValuesFrom [ owl:intersectionOf ( af-m:AFM_0000275 [ rdf:type owl:Restriction ; owl:onProperty ro:_0000087 ; owl:someValuesFrom af-rl:AFRL_0000127 ] ) ; rdf:type owl:Class ] ] ; skos:altLabel "analyte HQI" , "substance HQI" , "substance hit quality index" ; skos:definition "The analyte hit quality index is hit quality index of the measured spectrum of the analyte against a spectrum library. [Allotrope]" ; skos:prefLabel "analyte hit quality index" . ### http://purl.allotrope.org/ontologies/result#AFR_0001614 af-r:AFR_0001614 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001610 , iao:_0000590 ; skos:definition "A spectrum library name is a name that denotes a library of spectra used for substance identification by fingerprinting. [Allotrope]" ; skos:prefLabel "spectrum library name" . ### http://purl.allotrope.org/ontologies/result#AFR_0001615 af-r:AFR_0001615 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001610 ; skos:definition "The library search upper limit is an upper limit on the abscissa values of spectra to be searched. [Allotrope]" ; skos:prefLabel "library search upper limit" . ### http://purl.allotrope.org/ontologies/result#AFR_0001616 af-r:AFR_0001616 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001610 ; skos:definition "The library search lower limit is a lower limit on the abscissa values of spectra to be searched. [Allotrope]" ; skos:prefLabel "library search lower limit" . ### http://purl.allotrope.org/ontologies/result#AFR_0001617 af-r:AFR_0001617 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001616 ; skos:altLabel "library search lower wavenumber limit" ; skos:definition "The library search start wavenumber is a lower limit on the wavenumber values of spectra to be searched. [Allotrope]" ; skos:prefLabel "library search start wavenumber" . ### http://purl.allotrope.org/ontologies/result#AFR_0001618 af-r:AFR_0001618 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0001615 ; skos:altLabel "library search upper wavenumber limit" ; skos:definition "The library search stop wavenumber is an upper limit on the wavenumber values of spectra to be searched. [Allotrope]" ; skos:prefLabel "library search stop wavenumber" . ### http://purl.org/dc/terms/LicenseDocument dct:LicenseDocument rdf:type owl:Class . ### http://purl.org/dc/terms/RightsStatement dct:RightsStatement rdf:type owl:Class . ################################################################# # # Individuals # ################################################################# ### http://purl.allotrope.org/voc/attribution rdf:type owl:NamedIndividual , dct:RightsStatement ; dct:description """ These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations. 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