@prefix ro: . @prefix bfo: . @prefix dct: . @prefix map: . @prefix org: . @prefix owl: . @prefix pav: . @prefix rdf: . @prefix sio: . @prefix xml: . @prefix xsd: . @prefix af-c: . @prefix af-e: . @prefix af-m: . @prefix af-p: . @prefix af-q: . @prefix af-r: . @prefix af-x: . @prefix foaf: . @prefix prov: . @prefix qudt: . @prefix rdfs: . @prefix skos: . @prefix time: . @prefix vann: . @prefix void: . @prefix af-cq: . @prefix af-fn: . @prefix af-re: . @prefix af-rl: . @prefix af-cur: . @prefix af-map: . @base . rdf:type owl:Ontology ; owl:versionIRI ; owl:imports , ; dct:title "AFO obsolete and deprecated terms" ; dct:rights ; owl:priorVersion ; dct:contributor ; dct:publisher ; dct:issued "2019-07-01T12:00:00Z"^^xsd:dateTime ; dct:rights ; dct:license ; dct:modified "2019-05-17T12:00:00Z"^^xsd:dateTime ; owl:versionInfo "OLD/2019/06" . ################################################################# # # Annotation properties # ################################################################# ### http://purl.allotrope.org/ontologies/property#AFX_0000205 af-x:AFX_0000205 rdf:type owl:AnnotationProperty ; rdfs:range af-p:AFP_0001875 . ### http://purl.allotrope.org/ontologies/property#AFX_0000260 af-x:AFX_0000260 rdf:type owl:AnnotationProperty ; rdfs:range af-p:AFP_0002413 . ### http://purl.allotrope.org/ontologies/property#AFX_0001031 af-x:AFX_0001031 rdf:type owl:AnnotationProperty ; rdfs:range af-e:AFE_0000653 . ### http://purl.org/dc/terms/replacedBy dct:replacedBy rdf:type owl:AnnotationProperty . ################################################################# # # Datatypes # ################################################################# ### http://www.w3.org/2001/XMLSchema#date xsd:date rdf:type rdfs:Datatype . ################################################################# # # Object Properties # ################################################################# ### http://purl.allotrope.org/ontologies/property#AFX_0000060 af-x:AFX_0000060 rdf:type owl:ObjectProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0000185 af-x:AFX_0000185 rdf:type owl:ObjectProperty ; rdfs:range af-r:AFR_0000162 ; owl:deprecated "true"^^xsd:boolean ; skos:changeNote "2019-05-17 Deprecated, references obsolete class." ; skos:definition "Way in which the spectrum is represented, either with regularly spaced data points or with a list of centroided peaks." ; skos:prefLabel "spectrum representation" . ### http://purl.allotrope.org/ontologies/property#AFX_0000205 af-x:AFX_0000205 rdf:type owl:ObjectProperty ; rdfs:domain af-p:AFP_0001146 . ### http://purl.allotrope.org/ontologies/property#AFX_0000260 af-x:AFX_0000260 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0001138 ; rdfs:domain bfo:_0000015 . ### http://purl.allotrope.org/ontologies/property#AFX_0000817 af-x:AFX_0000817 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0000863 ; rdfs:range af-e:AFE_0001596 ; owl:deprecated "true"^^xsd:boolean ; skos:changeNote "2019-05-17 Deprecated, references obsolete class." ; skos:definition "The sample position is the position of the sample with respect to the related entity. [Allotrope]" ; skos:example "position of a sample on a tray" , "sample position of the sample relative to the UV beam path" ; skos:prefLabel "sample position" . ### http://purl.allotrope.org/ontologies/property#AFX_0000863 af-x:AFX_0000863 rdf:type owl:ObjectProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0000865 af-x:AFX_0000865 rdf:type owl:ObjectProperty ; rdfs:range af-e:AFE_0000678 ; owl:deprecated "true"^^xsd:boolean ; skos:changeNote "2019-05-17 Deprecated, references obsolete class." ; skos:definition "The type of plunger used in the syringe, either in barrel or in needle." ; skos:prefLabel "plunger type" . ### http://purl.allotrope.org/ontologies/property#AFX_0001031 af-x:AFX_0001031 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0001138 ; rdfs:domain af-e:AFE_0000354 . ### http://purl.allotrope.org/ontologies/property#AFX_0001138 af-x:AFX_0001138 rdf:type owl:ObjectProperty . ################################################################# # # Classes # ################################################################# ### http://purl.allotrope.org/ontologies/equipment#AFE_0000354 af-e:AFE_0000354 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000653 af-e:AFE_0000653 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000678 af-e:AFE_0000678 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/equipment#AFE_0001596 af-e:AFE_0001596 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/process#AFP_0001146 af-p:AFP_0001146 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/process#AFP_0001875 af-p:AFP_0001875 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/process#AFP_0002413 af-p:AFP_0002413 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/result#AFR_0000162 af-r:AFR_0000162 rdf:type owl:Class . ### http://purl.obolibrary.org/obo/BFO_0000015 bfo:_0000015 rdf:type owl:Class . ### http://xmlns.com/foaf/0.1/Organization foaf:Organization rdf:type owl:Class . ################################################################# # # Individuals # ################################################################# ### http://www.allotrope.org rdf:type owl:NamedIndividual , foaf:Organization ; foaf:name "Allotrope Foundation" . ### http://www.rsc.org rdf:type owl:NamedIndividual , foaf:Organization ; foaf:name "Royal Society of Chemistry" . ### http://purl.allotrope.org/voc/attribution rdf:type owl:NamedIndividual ; dct:description """ These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations. By using these taxonomies, you agree to the following terms and conditions applicable to its contents: ****************************************************************************** Copyright Notice and Terms for IUPAC Gold Book ______________________________________________________________________________ Copyright © 1998, Regents of the University of California All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS \"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. ****************************************************************************** Copyright Notice and Terms for PSI-MS (Proteomics Standards Initiative - Mass Spectrometry) Mass spectrometer output files and spectra interpretation _____________________________________________________________________________ Created by Matt Chambers, Andreas Bertsch, Marius Kallhardt, Eric Deutsch Fredrik Levander, Pierre-Alain Binz, and Gerhard Mayer. Publisher: HUPO Proteomics Standards Initiative Mass Spectrometry Standards Working Group and HUPO Proteomics Standards Initiative Proteomics Informatics Working Group. This work is used pursuant to a Creative Commons license available here: http://creativecommons.org/licenses/by/3.0/legalcode ****************************************************************************** Attribution Notice for National Center for Biomedical Ontology materials. This work contains material from the Cell Ontology and Clinical Measurement Ontology, available here: http://bioportal.bioontology.org/. ****************************************************************************** Attribution Notice for ChEBI This work contains material from the European Bioinformatics Institute’s ChEBI database. ****************************************************************************** Attribution Notice for Quantities Units Dimensions Data Types (http://www.qudt.org/) This work contains content from www.qudt.org and is used pursuant to a Creative Commons License available here: http://creativecommons.org/licenses/by-sa/3.0/us/legalcode. The original work may have been modified. ****************************************************************************** Copyright and Attribution Notice for Dublin Core Metadata Initiative Document This work contains material from the following DCMI document used pursuant to a creative commons license available here: https://creativecommons.org/licenses/by/4.0/legalcode. This material may have been modified or changed. Timestamped URL: http://dublincore.org/documents/2012/06/14/dcmi-terms/ Date Issued: 2012-06-14 Document Status: This is a DCMI Recommendation. Copyright © 1995-2015 DCMI. All Rights Reserved. DCMI liability, trademark/service mark, document use and software licensing rules apply. ****************************************************************************** """ ; dct:rightsHolder ; dct:title "Derivative works attribution" . ### http://purl.allotrope.org/voc/copyright rdf:type owl:NamedIndividual ; dct:description "(c) 2017 Allotrope Foundation" ; dct:title "(c) 2017 Allotrope Foundation" . ### http://purl.allotrope.org/voc/creative-commons-attribution-license rdf:type owl:NamedIndividual ; dct:description """This work is licensed under a Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/. THESE MATERIALS ARE PROVIDED \"AS IS\" AND ALLOTROPE EXPRESSLY DISCLAIMS ALL WARRANTIES, EXPRESS, IMPLIED OR STATUTORY, INCLUDING, WITHOUT LIMITATION, THE WARRANTIES OF NON-INFRINGEMENT, TITLE, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. Copyright © 2015-2019 Allotrope Foundation """ ; dct:rightsHolder ; dct:title "Creative Commons Attribution 4.0 International Public License" . ################################################################# # # Annotations # ################################################################# af-x:AFX_0000205 skos:prefLabel "scan law" ; skos:changeNote "2019-05-17 Deprecated, references obsolete class." ; owl:deprecated "true"^^xsd:boolean ; skos:definition "Describes the function in control of the scan (for scanning instruments). Commonly the scan function is linear, but in principle any function can be used. [PSI-MS]" . af-x:AFX_0000260 owl:deprecated "true"^^xsd:boolean ; skos:changeNote "2019-05-17 Deprecated, references obsolete class." ; skos:prefLabel "process state" ; skos:definition "The S88 process state of the execution. [Allotrope]" . af-x:AFX_0001031 skos:definition "Status of the device, turned on or off." ; skos:prefLabel "device state" ; skos:changeNote "2019-05-17 Deprecated, references obsolete class." ; owl:deprecated "true"^^xsd:boolean . ### Generated by the OWL API (version 4.1.3) https://github.com/owlcs/owlapi