@prefix ro: . @prefix bfo: . @prefix dct: . @prefix map: . @prefix org: . @prefix owl: . @prefix pav: . @prefix rdf: . @prefix sio: . @prefix xml: . @prefix xsd: . @prefix af-c: . @prefix af-e: . @prefix af-m: . @prefix af-p: . @prefix af-q: . @prefix af-r: . @prefix af-x: . @prefix foaf: . @prefix prov: . @prefix qudt: . @prefix rdfs: . @prefix skos: . @prefix time: . @prefix vann: . @prefix void: . @prefix af-cq: . @prefix af-fn: . @prefix af-re: . @prefix af-rl: . @prefix af-cur: . @prefix af-map: . @base . rdf:type owl:Ontology ; owl:versionIRI ; owl:imports , ; dct:title "AFO obsolete and deprecated terms" ; dct:rights ; dct:contributor ; owl:priorVersion ; dct:issued "2018-07-31T12:00:00Z"^^xsd:dateTime ; dct:publisher ; dct:modified "2018-07-23T12:00:00Z"^^xsd:dateTime ; dct:rights ; dct:license ; owl:versionInfo "OLD/2018/07" . ################################################################# # # Datatypes # ################################################################# ### http://www.w3.org/2001/XMLSchema#date xsd:date rdf:type rdfs:Datatype . ################################################################# # # Object Properties # ################################################################# ### http://purl.allotrope.org/ontologies/property#AFX_0001555 af-x:AFX_0001555 rdf:type owl:ObjectProperty ; rdfs:range af-m:AFM_0000257 ; owl:deprecated "true"^^xsd:boolean ; skos:changeNote "2016-04-25 add concept as superclass [OSTHUS]" , "2017-05-26 Updated definition and definition source [OSTHUS]" , "2018-08-03 Deprecated because of deprecated af-m:AFM_0000257, use bfo:has participant with sample role [Allotrope]" ; skos:definition "A sample is a representitive quantity of a total material. [Allotrope]" ; skos:editorialNote "needs revisited in context of material roles, af-m:sample might be a role" ; skos:prefLabel "sample" . ### http://purl.allotrope.org/ontologies/property#AFX_0002702 af-x:AFX_0002702 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0002803 ; rdfs:range qudt:QuantityValue ; dct:isReplacedBy qudt:quantityValue ; owl:deprecated "true"^^xsd:boolean ; skos:changeNote "2018-09-05 Deprecated in favor of qudt:quantityValue [Allotrope]" ; skos:definition "The relation to an information facet that describes the quantification. [Allotrope]" ; skos:prefLabel "has quantity value" . ### http://purl.allotrope.org/ontologies/property#AFX_0002803 af-x:AFX_0002803 rdf:type owl:ObjectProperty . ################################################################# # # Data properties # ################################################################# ### http://purl.allotrope.org/ontologies/property#AFX_0000619 af-x:AFX_0000619 rdf:type owl:DatatypeProperty ; rdfs:subPropertyOf af-x:AFX_0000690 ; rdfs:range [ rdf:type rdfs:Datatype ; owl:unionOf ( xsd:date xsd:dateTime xsd:dateTimeStamp ) ] ; owl:deprecated "true"^^xsd:boolean ; skos:altLabel "date time" , "point in time" , "timestamp" ; skos:changeNote "2017-12-01 Changed pref label, moved under has value [OSTHUS]" , "2018-09-05 Deprecated, use has value af-x:AFX_0000690 instead [Allotrope]" ; skos:definition "Date time is a general purpose data property to assign a point in time to an entity. [Allotrope]" ; skos:prefLabel "has timestamp value" . ### http://purl.allotrope.org/ontologies/property#AFX_0000690 af-x:AFX_0000690 rdf:type owl:DatatypeProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0002746 af-x:AFX_0002746 rdf:type owl:DatatypeProperty ; rdfs:subPropertyOf af-x:AFX_0000690 ; rdfs:range xsd:boolean ; owl:deprecated "true"^^xsd:boolean ; skos:changeNote "2018-09-05 Deprecated, use has value af-x:AFX_0000690 instead [Allotrope]" ; skos:definition "The literal boolean value true/false as part of some truth (boolean) datum. [Allotrope]" ; skos:prefLabel "has boolean value" . ################################################################# # # Classes # ################################################################# ### http://purl.allotrope.org/ontologies/material#AFM_0000257 af-m:AFM_0000257 rdf:type owl:Class . ### http://qudt.org/schema/qudt#QuantityValue qudt:QuantityValue rdf:type owl:Class . ### http://xmlns.com/foaf/0.1/Organization foaf:Organization rdf:type owl:Class . ################################################################# # # Individuals # ################################################################# ### http://www.allotrope.org rdf:type owl:NamedIndividual , foaf:Organization ; foaf:name "Allotrope Foundation" . ### http://www.rsc.org rdf:type owl:NamedIndividual , foaf:Organization ; foaf:name "Royal Society of Chemistry" . ### http://purl.allotrope.org/voc/attribution rdf:type owl:NamedIndividual ; dct:description """ These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations. By using these taxonomies, you agree to the following terms and conditions applicable to its contents: ****************************************************************************** Copyright Notice and Terms for IUPAC Gold Book ______________________________________________________________________________ Copyright © 1998, Regents of the University of California All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS \"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. ****************************************************************************** Copyright Notice and Terms for PSI-MS (Proteomics Standards Initiative - Mass Spectrometry) Mass spectrometer output files and spectra interpretation _____________________________________________________________________________ Created by Matt Chambers, Andreas Bertsch, Marius Kallhardt, Eric Deutsch Fredrik Levander, Pierre-Alain Binz, and Gerhard Mayer. Publisher: HUPO Proteomics Standards Initiative Mass Spectrometry Standards Working Group and HUPO Proteomics Standards Initiative Proteomics Informatics Working Group. This work is used pursuant to a Creative Commons license available here: http://creativecommons.org/licenses/by/3.0/legalcode ****************************************************************************** Attribution Notice for National Center for Biomedical Ontology materials. This work contains material from the Cell Ontology and Clinical Measurement Ontology, available here: http://bioportal.bioontology.org/. ****************************************************************************** Attribution Notice for ChEBI This work contains material from the European Bioinformatics Institute’s ChEBI database. ****************************************************************************** Attribution Notice for Quantities Units Dimensions Data Types (http://www.qudt.org/) This work contains content from www.qudt.org and is used pursuant to a Creative Commons License available here: http://creativecommons.org/licenses/by-sa/3.0/us/legalcode. The original work may have been modified. ****************************************************************************** Copyright and Attribution Notice for Dublin Core Metadata Initiative Document This work contains material from the following DCMI document used pursuant to a creative commons license available here: https://creativecommons.org/licenses/by/4.0/legalcode. This material may have been modified or changed. Timestamped URL: http://dublincore.org/documents/2012/06/14/dcmi-terms/ Date Issued: 2012-06-14 Document Status: This is a DCMI Recommendation. Copyright © 1995-2015 DCMI. All Rights Reserved. DCMI liability, trademark/service mark, document use and software licensing rules apply. ****************************************************************************** """ ; dct:rightsHolder ; dct:title "Derivative works attribution" . ### http://purl.allotrope.org/voc/copyright rdf:type owl:NamedIndividual ; dct:description "(c) 2017 Allotrope Foundation" ; dct:title "(c) 2017 Allotrope Foundation" . ### http://purl.allotrope.org/voc/creative-commons-attribution-license rdf:type owl:NamedIndividual ; dct:description """This work is licensed under a Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/. THESE MATERIALS ARE PROVIDED \"AS IS\" AND ALLOTROPE EXPRESSLY DISCLAIMS ALL WARRANTIES, EXPRESS, IMPLIED OR STATUTORY, INCLUDING, WITHOUT LIMITATION, THE WARRANTIES OF NON-INFRINGEMENT, TITLE, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. Copyright © 2015-2018 Allotrope Foundation """ ; dct:rightsHolder ; dct:title "Creative Commons Attribution 4.0 International Public License" . ### Generated by the OWL API (version 4.1.3) https://github.com/owlcs/owlapi