@prefix : . @prefix cl: . @prefix go: . @prefix ro: . @prefix bfo: . @prefix dct: . @prefix iao: . @prefix obi: . @prefix owl: . @prefix pav: . @prefix rdf: . @prefix xml: . @prefix xsd: . @prefix af-c: . @prefix af-e: . @prefix af-m: . @prefix af-p: . @prefix af-q: . @prefix af-r: . @prefix af-x: . @prefix chmo: . @prefix doap: . @prefix envo: . @prefix foaf: . @prefix ncit: . @prefix pato: . @prefix qudt: . @prefix rdfs: . @prefix skos: . @prefix time: . @prefix af-rl: . @prefix af-cur: . @base . rdf:type owl:Ontology ; owl:versionIRI ; owl:imports , , ; dct:rights ; dct:title "AFO Relation (CR/2018/07)"^^xsd:string ; dct:contributor ; dct:issued "2018-07-31T12:00:00Z"^^xsd:dateTime ; rdfs:comment "Allotrope Ontology of legacy relations used in previous AFT versions, these should be no longer used." ; dct:modified "2018-07-19T10:00:00Z"^^xsd:dateTime ; owl:versionInfo "CR/2018/07" ; owl:priorVersion ; dct:rights . ################################################################# # # Annotation properties # ################################################################# ### http://purl.allotrope.org/ontologies/property#AFX_0001144 af-x:AFX_0001144 rdf:type owl:AnnotationProperty ; skos:altLabel "has predicate" ; skos:definition "A reference to an object or datatype property. [Allotrope]" ; skos:prefLabel "has property" . ### http://purl.allotrope.org/ontologies/property#AFX_0001166 af-x:AFX_0001166 rdf:type owl:AnnotationProperty ; skos:definition "A relation to a class of individuals. [Allotrope]" ; skos:prefLabel "has class" ; rdfs:range rdfs:Class . ################################################################# # # Object Properties # ################################################################# ### http://purl.allotrope.org/ontologies/property#AFX_0000388 af-x:AFX_0000388 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf iao:_0000136 ; skos:altLabel "in context" , "in scope" , "in situation" , "scope" ; skos:changeNote "2017-05-08 aligned with BFO [OSTHUS]" ; skos:definition "A scope defines a situation or context in which a dependent entity such as a condition or contextual role occurs or is valid. [Allotrope]" ; skos:prefLabel "has scope" . ### http://purl.allotrope.org/ontologies/property#AFX_0000939 af-x:AFX_0000939 rdf:type owl:ObjectProperty , owl:TransitiveProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0000972 af-x:AFX_0000972 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0002793 ; rdf:type owl:TransitiveProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0002731 af-x:AFX_0002731 rdfs:subPropertyOf af-x:AFX_0000388 . ### http://purl.allotrope.org/ontologies/property#AFX_0002734 af-x:AFX_0002734 rdf:type owl:ObjectProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0002793 af-x:AFX_0002793 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf bfo:_0000051 ; rdf:type owl:TransitiveProperty ; af-x:AFX_0002809 ; skos:definition "Has proper part is an antisymmetric, irreflexive (normally transitive) relation between a whole and a distinct part. [SIO]" ; skos:example "An atom has subatomic particles as its proper parts." ; skos:prefLabel "has proper part" . ### http://purl.allotrope.org/ontologies/property#AFX_0002803 af-x:AFX_0002803 rdfs:subPropertyOf af-x:AFX_0002793 . ### http://purl.allotrope.org/ontologies/property#AFX_0002819 af-x:AFX_0002819 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf iao:_0000219 ; owl:inverseOf af-x:AFX_0002820 ; rdfs:domain af-r:AFR_0000928 ; skos:definition "The relation between an index and the entity in an aggregate or list it denotes. [Allotrope]" ; skos:prefLabel "index of" . ### http://purl.allotrope.org/ontologies/property#AFX_0002820 af-x:AFX_0002820 rdf:type owl:ObjectProperty ; rdfs:range af-r:AFR_0000928 ; skos:definition "The relation between an object and an index that denotes the object within an aggregate the object is member of. [Allotrope]" ; skos:prefLabel "has index" . ### http://purl.allotrope.org/ontologies/property#AFX_0002821 af-x:AFX_0002821 rdf:type owl:ObjectProperty ; skos:definition "The relation between a proxy entity and a target entity where the target entity is a real participant in some process or the subject of an information content entity but is not referenced directly, but instead the proxy is used as a surrogate or representation for it. [Allotrope]" ; skos:example "A measurement of a quality to indirectly measure another quality." , "An object aggregate as a proxy for a collection." ; skos:prefLabel "proxy for" . ### http://purl.allotrope.org/ontologies/property#AFX_0002822 af-x:AFX_0002822 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf owl:topObjectProperty ; rdfs:range skos:Concept ; skos:definition "The relation an entity and an associated SKOS concept." ; skos:note "The relation is intended to relate a classifying datum with a SKOS concept, but there might be other uses." ; skos:prefLabel "has concept" . ### http://purl.allotrope.org/ontologies/property#AFX_0002832 af-x:AFX_0002832 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0002793 ; af-x:AFX_0002809 ; skos:definition "A core relation that holds between a whole and a proper part without an intermediate part at a level of granularity. [Allotrope]" ; skos:prefLabel "has direct part" . ### http://purl.allotrope.org/ontologies/property#AFX_0002833 af-x:AFX_0002833 rdf:type owl:ObjectProperty ; owl:inverseOf af-x:AFX_0002834 ; rdf:type owl:TransitiveProperty ; skos:altLabel "has follower" , "has successor" ; skos:definition "Is followed by is a relation between entities that are items in an ordered sequence. For each pair of entities P, S being a member of the sequence, there exists an ordering function o so that o(P) < o(S). Iff o(P) < o(S) then P is followed by S. [Allotrope]" ; skos:prefLabel "is followed by" . ### http://purl.allotrope.org/ontologies/property#AFX_0002834 af-x:AFX_0002834 rdf:type owl:ObjectProperty , owl:TransitiveProperty ; skos:altLabel "has predecessor" ; skos:definition "Follows is a relation between entities that are items in an ordered sequence. For each pair of entities P, S being a member of the sequence, there exists an ordering function o so that o(P) < o(S). Iff o(S) > o(P) the S follows P. [Allotrope]" ; skos:prefLabel "follows" . ### http://purl.allotrope.org/ontologies/property#AFX_0002835 af-x:AFX_0002835 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0002833 ; owl:inverseOf af-x:AFX_0002836 ; skos:altLabel "has next" , "next" ; skos:definition "Is immediately followed by is a relation between entities that are items in an ordered sequence. For each pair of entities P, S being a member of the sequence, there exists an ordering function o so that o(P) < o(S). Iff for members P, S of the sequence, there is no member I that o(P)o(I)>o(P), then S follows P. [Allotrope]" ; skos:prefLabel "immediately follows" . ### http://purl.allotrope.org/ontologies/property#AFX_0002837 af-x:AFX_0002837 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf owl:topObjectProperty ; skos:definition "Relation of is a relation of a relational entity to the referred entities. [Allotrope]" ; skos:example "A ratio quality is relation of two qualities of the same kind, whose magnitude is a ratio value." , "A sum datum is relation of its summands." ; skos:note """This predicate is often used with punning, to avoid pre-coordination of ratios or differences. A af-q:ratio 'af-x:relation of' pato:mass is a mass ratio quality.""" ; skos:prefLabel "relation of" . ### http://purl.allotrope.org/ontologies/property#AFX_0002838 af-x:AFX_0002838 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0002837 ; skos:definition "Relates from is a relation between a directed relational entity to the target of the relation. [Allotrope]" ; skos:example "A ratio relates to the denominator." ; skos:prefLabel "relates to" . ### http://purl.allotrope.org/ontologies/property#AFX_0002839 af-x:AFX_0002839 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0002837 ; skos:definition "Relates from is a relation between a directed relational entity to the source of the relation. [Allotrope]" ; skos:example "A ratio relates from the numerator." ; skos:prefLabel "relates from" . ### http://purl.obolibrary.org/obo/BFO_0000083 bfo:_0000083 rdf:type owl:ObjectProperty ; rdfs:domain bfo:_0000004 ; rdfs:range bfo:_0000006 ; skos:altLabel "occupies spatial region" , "occupies spatial region at some time" ; skos:definition "b located at r means that r is a spatial region in which independent continuant b is exactly located. [BFO]" ; skos:prefLabel "located at" . ### http://purl.obolibrary.org/obo/OBI_0000314 obi:_0000314 rdfs:subPropertyOf af-x:AFX_0002821 . ### http://purl.obolibrary.org/obo/OBI_0000643 obi:_0000643 rdf:type owl:ObjectProperty ; rdfs:subPropertyOf af-x:AFX_0002793 ; rdf:type owl:TransitiveProperty . ### http://purl.obolibrary.org/obo/RO_0002351 ro:_0002351 rdfs:subPropertyOf af-x:AFX_0002793 ; rdf:type owl:AsymmetricProperty . ### http://qudt.org/schema/qudt#quantityValue qudt:quantityValue rdf:type owl:ObjectProperty ; pav:importedFrom ; skos:prefLabel "quantity value" . ################################################################# # # Individuals # ################################################################# ### http://purl.allotrope.org/voc/attribution rdf:type owl:NamedIndividual ; dct:description """ These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations. By using these taxonomies, you agree to the following terms and conditions applicable to its contents: ****************************************************************************** Copyright Notice and Terms for IUPAC Gold Book ______________________________________________________________________________ Copyright © 1998, Regents of the University of California All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 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Publisher: HUPO Proteomics Standards Initiative Mass Spectrometry Standards Working Group and HUPO Proteomics Standards Initiative Proteomics Informatics Working Group. This work is used pursuant to a Creative Commons license available here: http://creativecommons.org/licenses/by/3.0/legalcode ****************************************************************************** Attribution Notice for National Center for Biomedical Ontology materials. This work contains material from the Cell Ontology and Clinical Measurement Ontology, available here: http://bioportal.bioontology.org/. ****************************************************************************** Attribution Notice for ChEBI This work contains material from the European Bioinformatics Institute’s ChEBI database. ****************************************************************************** Attribution Notice for Quantities Units Dimensions Data Types (http://www.qudt.org/) This work contains content from www.qudt.org and is used pursuant to a Creative Commons License available here: http://creativecommons.org/licenses/by-sa/3.0/us/legalcode. The original work may have been modified. ****************************************************************************** Copyright and Attribution Notice for Dublin Core Metadata Initiative Document This work contains material from the following DCMI document used pursuant to a creative commons license available here: https://creativecommons.org/licenses/by/4.0/legalcode. This material may have been modified or changed. Timestamped URL: http://dublincore.org/documents/2012/06/14/dcmi-terms/ Date Issued: 2012-06-14 Document Status: This is a DCMI Recommendation. Copyright © 1995-2015 DCMI. All Rights Reserved. DCMI liability, trademark/service mark, document use and software licensing rules apply. ****************************************************************************** """ ; dct:title "Derivative works attribution" . ### http://purl.allotrope.org/voc/copyright rdf:type owl:NamedIndividual ; dct:description "(c) 2017 Allotrope Foundation" ; dct:title "(c) 2017 Allotrope Foundation" . ### http://purl.allotrope.org/voc/creative-commons-attribution-license rdf:type owl:NamedIndividual ; dct:description """This work is licensed under a Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/. THESE MATERIALS ARE PROVIDED \"AS IS\" AND ALLOTROPE EXPRESSLY DISCLAIMS ALL WARRANTIES, EXPRESS, IMPLIED OR STATUTORY, INCLUDING, WITHOUT LIMITATION, THE WARRANTIES OF NON-INFRINGEMENT, TITLE, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. Copyright © 2015-2018 Allotrope Foundation """ ; dct:title "Creative Commons Attribution 4.0 International Public License" . ################################################################# # # Annotations # ################################################################# af-x:AFX_0000976 skos:altLabel "capability" . af-x:AFX_0001154 skos:altLabel "classified by" . af-x:AFX_0002716 skos:altLabel "identified by" , "identifier" . af-x:AFX_0002729 skos:note "This relation is intended to bridge between different perspectives on the taxonomy of information content entities." ; skos:altLabel "implemented as" , "represented as" , "concretized as" ; skos:changeNote "2018-08-29 Changed pref label. [Allotrope]" ; skos:altLabel "facet represented as" . af-x:AFX_0002802 af-x:AFX_0002808 dct:description , ; skos:altLabel "description" , "described by" . af-x:AFX_0002805 skos:altLabel "specification" , "specified by" . af-x:AFX_0002807 skos:altLabel "represents facet" ; skos:changeNote "2018-08-29 Changed pref label. [Allotrope]" ; skos:altLabel "implements" , "concretizes" , "represents" . qudt:quantityKind pav:importedFrom . ### Generated by the OWL API (version 4.1.3) https://github.com/owlcs/owlapi