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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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SZip encoding property of a SZip filter. [Allotrope]
Creative Commons Attribution 4.0 International Public License
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SZip encoding property of a SZip filter. [Allotrope]
Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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A selection of all the datapoints in the dataspace. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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A selection that retains only the overlapping portions of the new selection and the existing selection (Binary AND) With the HDF API this is done by calling H5Sselect_hyperslab and select operation H5S_SELECT_AND. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Value representation for arrays or variable length types. [Allotrope]
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Atomic datatypes are those that are not decomposed at the datatype interface level, such as integers and floats. [Allotrope]
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User defined fill value for an atomic datatype. [Allotrope]
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Attributes are small named datasets that are attached to primary datasets, groups, or named datatypes. Attributes can be used to describe the nature and/or the intended usage of a dataset or group. An attribute has two parts: (1) a name and (2) a value. The value part contains one or more data entries of the same datatype. [Allotrope]
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Relation between an HDF object and its attributes. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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The block is a count on the number of repetitions of the hyperslab. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Size, in bytes, of the type conversion and background buffers. [HDF]
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Creative Commons Attribution 4.0 International Public License
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Relation between link or string datatype and character set used. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Relation between dataset and chunk. [Allotrope]
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The chunk preemption policy for all datasets. This must be between 0 and 1 inclusive and indicates the weighting according to which chunks which have been fully read or written are penalized when determining which chunks to flush from cache. A value of 0 means fully read or written chunks are treated no differently than other chunks (the preemption is strictly LRU) while a value of 1 means fully read or written chunks are always preempted before other chunks. If your application only reads or writes data once, this can be safely set to 1. Otherwise, this should be set lower depending on how often you re-read or re-write the same data. [HDF]
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The number of chunk slots in the raw data chunk cache hash table , the maximum possible number of bytes in the raw data chunk cache, and the preemption policy value. [HDF]
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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ChunkMode specifies whether I/O is to be performed as linked-chunk I/O or as multi-chunk I/O. This function overrides the HDF5 Library's internal algorithm for determining which mechanism to use. When an application uses collective I/O with chunked storage, the HDF5 Library normally uses an internal algorithm to determine whether that I/O activity should be conducted as one linked-chunk I/O or as multi-chunk I/O. ChunkMode is provided so that an application can override the library's alogorithm in circumstances where the library might lack the information needed to make an optimal desision.
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Specifies whether I/O is to be performed as linked-chunk I/O or as multi-chunk I/O. When an application uses collective I/O with chunked storage, the HDF5 Library normally uses an internal algorithm to determine whether that I/O activity should be conducted as one linked-chunk I/O or as multi-chunk I/O. ChunkMode is provided so that an application can override the library's alogorithm in circumstances where the library might lack the information needed to make an optimal desision. [HDF]
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ChunkMode specifies whether I/O is to be performed as linked-chunk I/O or as multi-chunk I/O. This function overrides the HDF5 Library's internal algorithm for determining which mechanism to use. When an application uses collective I/O with chunked storage, the HDF5 Library normally uses an internal algorithm to determine whether that I/O activity should be conducted as one linked-chunk I/O or as multi-chunk I/O. ChunkMode is provided so that an application can override the library's algorithm in circumstances where the library might lack the information needed to make an optimal decision. [HDF]
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Specifies whether I/O is to be performed as linked-chunk I/O or as multi-chunk I/O. When an application uses collective I/O with chunked storage, the HDF5 Library normally uses an internal algorithm to determine whether that I/O activity should be conducted as one linked-chunk I/O or as multi-chunk I/O. ChunkMode is provided so that an application can override the library's algorithm in circumstances where the library might lack the information needed to make an optimal decision. [HDF]
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Chunked storage involves dividing the dataset into equal-sized "chunks" that are stored separately. [Allotrope]
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Use collective I/O access. [Allotrope]
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Compact storage is used when the amount of data is small and can be stored directly in the object header. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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User defined fill value for a composite datatype (array, compound or variable length). [HDF]
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A collection of one or more atomic types or small arrays of such types. Similar to a struct in C or a common block in Fortran. [Allotrope]
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Value representation for compound types. [Allotrope]
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Index coordinate of a point in multi-dimensional array. [Allotrope]
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index in dimension. [Allotrope]
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The count is the number of elements in the hyperslab selection. When the stride is 1, the selection is a hyper rectangle with a corner at the offset and size count[0] by count[1] by.... When stride is greater than one, the hyperslab bounded by the offset and the corners defined by stride[n] * count[n]. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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A data stream represents the bitstream of data flowing from source to target. The data stream may include data conversion if datatypes of source and target differ, and may include transformations like compression or encryption. Source and targets are hyperslabs on datasets. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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A multi-dimensional array of data elements, together with supporting metadata. [Allotrope]
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A dataset dataspace describes the dimensionality of the dataset. The dimensions of a dataset can be fixed (unchanging), or they may be unlimited, which means that they are extendible (i.e. they can grow larger). [Allotrope]
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Relation between an attribute or dataset with its used dataspace. [Allotrope]
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An object that describes the storage format of the individual data points in a data set. There are two categories of datatypes: atomic and compound datatypes. An atomic type is a type which cannot be decomposed into smaller units at the API level. A compound datatype is a collection fo one or more atomic types or small arrays of such types. [Allotrope]
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Relation between an array datatype, a compound datatype member, a variable length datatype, an attribute or a dataset and its datatype. [Allotrope]
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An object that describes the storage format of the individual data points in a data set. There are two categories of datatypes: atomic and compound datatypes. An atomic type is a type which cannot be decomposed into smaller units at the API level. A compound datatype is a collection of one or more atomic types or small arrays of such types. [Allotrope]
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Allocate dataset storage space at the default time. (Defaults differ by storage method.) [HDF]
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Fill value is the library default. [Allotrope]
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synonyms: default file access mode
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Allocate dataset storage space at the default time. Defaults differ by storage method. [HDF]
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Creative Commons Attribution 4.0 International Public License
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Relation between an array datatype, chunk or dataspace with a dimension. [Allotrope]
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index of the dimension. [Allotrope]
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xsd:int based datatype restricted to the range of 0 to 31. Used for indexing dimensions. [Allotrope]
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Relation beween a hyper slab and its dimension selection. [Allotrope]
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Relation between a hyper slab and its dimension selection. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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Allocate all space when the dataset is created. (Default for compact datasets.) [HDF]
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Allocate all space when the dataset is created. Default for compact datasets. [HDF]
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Creative Commons Attribution 4.0 International Public License
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A one-to-one mapping between a set of symbols and a set of integer values, and an order is imposed on the symbols by their integer values. The symbols are passed between the application and library as character strings and all the values for a particular enumeration datatype are of the same integer type, which is not necessary a native type. [Allotrope]
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Error detection check property of a dataset. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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Exponent field property of a field. [Allotrope]
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File access mode property of a link. [Allotrope]
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Defines the location (bit position of least significant bit of the filed) and size (in bits) of the field. [Allotrope]
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synonyms: HDF 5 file
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synonyms: HDF 5 file
A container for storing grouped collections of multi-dimensional arrays containing scientific data following the HDF 5 specification. [Allotrope]
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Determines whether an existing file will be overwritten, opened for read-only access, or opened for read/write access. All newly created files are opened for both reading and writing. [Allotrope]
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Fill values are written to the dataset when storage space is allocated only if there is a user-defined fill value, i.e., one set with H5Pset_fill_value. (Default)
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Fill values are written to the dataset when storage space is allocated only if there is a user-defined fill value, i.e., one set with H5Pset_fill_value. Default. [HDF]
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Fill values are never written to the dataset. [Allotrope]
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Fill values are written to the dataset when storage space is allocated. [Allotrope]
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Fill time property of a dataset. [Allotrope]
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Creative Commons Attribution 4.0 International Public License
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Fill value status property of a dataset. [Allotrope]
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Filter property of a dataset. [Allotrope]
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Floating-point type, using variable MinBits method. The scaleFactor denotes the decimal scale factor for D-scaling and can be positive, negative or zero. This is the current implementation of the library. [HDF]
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Floating-point type, using fixed MinBits method. The scaleFactor denotes MinBits for E-scaling and must be a positive integer. This is not currently implemented by the library. [HDF]
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A grouping structure containing instances of zero or more groups or datasets, together with supporting metadata. [Allotrope]
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A direct association between a name and the object where both exist in a single HDF5 address space. [Allotrope]
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A portion of a dataset. A hyperslab selection can be a logically contiguous collection of points in a dataspace or a regular pattern of points or blocks in a dataspace. [Allotrope]
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MSB of mantissa isn't stored, always 1. [Allotrope]
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Allocate space incrementally, as data is written to the dataset. (Default for chunked storage datasets.) Chunked datasets: Storage space allocation for each chunk is deferred until data is written to the chunk. Contiguous datasets: Incremental storage space allocation for contiguous data is treated as late allocation. Compact datasets: Incremental allocation is not allowed with compact datasets; H5Pset_alloc_time will return an error. [HDF]
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Allocate space incrementally, as data is written to the dataset. Default for chunked storage datasets. [HDF]
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Use independent I/O access (default) [Allotrope]
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Use independent I/O access Default. [Allotrope]
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Index in dimension 0. [Allotrope]
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Index in dimension 1. [Allotrope]
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Index in dimension 10. [Allotrope]
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Index in dimension 11. [Allotrope]
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Index in dimension 12. [Allotrope]
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Index in dimension 13. [Allotrope]
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Index in dimension 14. [Allotrope]
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Index in dimension 15. [Allotrope]
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Index in dimension 16. [Allotrope]
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Index in dimension 17. [Allotrope]
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Index in dimension 18. [Allotrope]
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Index in dimension 19. [Allotrope]
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Index in dimension 2. [Allotrope]
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Index in dimension 20. [Allotrope]
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Index in dimension 21. [Allotrope]
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Index in dimension 22. [Allotrope]
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Index in dimension 23. [Allotrope]
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Index in dimension 24. [Allotrope]
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Index in dimension 25. [Allotrope]
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Index in dimension 26. [Allotrope]
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Index in dimension 27. [Allotrope]
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Index in dimension 28. [Allotrope]
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Index in dimension 29. [Allotrope]
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Index in dimension 3. [Allotrope]
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Index in dimension 30. [Allotrope]
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Index in dimension 31. [Allotrope]
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Index in dimension 4. [Allotrope]
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Index in dimension 5. [Allotrope]
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Index in dimension 6. [Allotrope]
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Index in dimension 7. [Allotrope]
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Index in dimension 8. [Allotrope]
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Index in dimension 9. [Allotrope]
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Non-negative xsd:long datatype. Used to address a point per dimension. [Allotrope]
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Integer type. The scaleFactor denotes MinBits and it should be a positive integer or H5Z_SO_INT_MINBITS_DEFAULT. If it is less than 0, the library will reset it to 0 since it is not implemented. [HDF]
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If any internal bits (that is, bits between the sign bit, the mantissa field, and the exponent field but within the precision field) are unused, they will be filled according to this property. [Allotrope]
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flag indicating that a string type is of variable length. [Allotrope]
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Allocate all space when data is first written to the dataset. (Default for contiguous datasets.) [HDF]
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Allocate all space when data is first written to the dataset. Default for contiguous datasets. [HDF]
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Relation between a dataset and its storage layout. [Alltrope]
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Relation between a dataset and its storage layout. [Allotrope]
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Least significant bit padding property of an atomic datatype. [Allotrope]
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Relation between a group and link. [Allotrope]
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Relation between a link and its target named object. [Allotrope]
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Mantissa field property of a field. [Allotrope]
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Relation between collection and the members of it. [Allotrope]
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Most significant bit padding property of an atomic datatype. [Allotrope]
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MSB of mantissa is always 1. [Allotrope]
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Named datatypes are either atomic or compound datatypes that have been specifically designated to be shared across datasets. [Allotrope]
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Not normalized. [Allotrope]
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Normalization property of a float datatype. [Allotrope]
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Null terminate as C does. [Allotrope]
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The bit offset of the first significant bit. The significant bits of an atomic datum can be offset from the beginning of the memory for that datum by an amount of padding. [Allotrope]
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A mechanism for describing data which cannot be otehrwise described by HDF5. The only properties associated with opaque types are a size in bytes and an ASCII tag. [Allotrope]
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A mechanism for describing data which cannot be otherwise described by HDF5. The only properties associated with opaque types are a size in bytes and an ASCII tag. [Allotrope]
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Order property of a datatype. [Allotrope]
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Pad with spaces as FORTRAN does. [Allotrope]
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Addresses a point in the dataspace. [Allotrope]
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A selection of individual datapoints in the dataspace. [Allotrope]
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The precision is the number of significant bits which, unless padding is present, is 8 times larger than the value returned by size. [Allotrope]
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In a combined selection the predicate points to the existing selection that the compination operator is applied on. [Allotrope]
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In a combined selection the predicate points to the existing selection that the combination operator is applied on. [Allotrope]
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synonyms: read only file access mode
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synonyms: read/write file access mode
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Relation between the HDF file and its root group. [Allotrope]
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Scale type property of a dataset. [Allotrope]
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(1) A subset of a dataset or a dataspace, up to the entire dataset of dataspace. (2) The elements of an array or dataset that are marked for I/O.
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(1) A subset of a dataset or a dataspace, up to the entire dataset of dataspace. (2) The elements of an array or dataset that are marked for I/O. [HDF]
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Relation between a selection and its target, either a dataspace or another selection. [Allotrope]
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Sign property of an integer datatype. [Allotrope]
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Sign field property of a field. [Allotrope]
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synonyms: size of datatype, size of dimension
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synonyms: size of datatype, size of dimension
Size of a dimension or size a datatype in bytes. For variable length strings or variable length datatypes the size is the size of the structure holding the pointer to the variable length data, not the size of the data. [HDF]
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smallDataBlockSize reserves blocks of size bytes for the contiguous storage of the raw data portion of small datasets. The HDF5 library then writes the raw data from small datasets to this reserved space, thus reducing unnecessary discontinuities within blocks of meta data and improving I/O performance. A small data block is actually allocated the first time a qualifying small dataset is written to the file. Space for the raw data portion of this small dataset is suballocated within the small data block. The raw data from each subsequent small dataset is also written to the small data block until it is filled; additional small data blocks are allocated as required. The HDF5 library employs an algorithm that determines whether I/O performance is likely to benefit from the use of this mechanism with each dataset as storage space is allocated in the file. A larger size will result in this mechanism being employed with larger datasets. Setting size to zero (0) disables the small data block mechanism.
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smallDataBlockSize reserves blocks of size bytes for the contiguous storage of the raw data portion of small datasets. The HDF5 library then writes the raw data from small datasets to this reserved space, thus reducing unnecessary discontinuities within blocks of meta data and improving I/O performance. A small data block is actually allocated the first time a qualifying small dataset is written to the file. Space for the raw data portion of this small dataset is suballocated within the small data block. The raw data from each subsequent small dataset is also written to the small data block until it is filled; additional small data blocks are allocated as required. The HDF5 library employs an algorithm that determines whether I/O performance is likely to benefit from the use of this mechanism with each dataset as storage space is allocated in the file. A larger size will result in this mechanism being employed with larger datasets. Setting size to zero (0) disables the small data block mechanism. [HDF]
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An indirect association between a name and an object in an HDF5 file. [Allotrope]
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The start offset defines the origin of the hyperslab in the original dataspace. [Allotrope]
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The HDF5 format makes it possible to store data in a variety of ways. The default storage layout format is contiguous, meaning that data is stored in the same linear way that it is organized in memory. Two other storage layout formats are currently defined for HDF5: compact, and chunked. In the future, other storage layouts may be added. [Allotrope]
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The stride is the number of elements to increment between selected elements. A stride of ‘1’ is every element, a stride of ‘2’ is every second element, etc. [Allotrope]
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String padding property of a string datatype. [Allotrope]
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The string datatype has a fixed length, but the string may be shorter than the length. The StringPadding defines the storage mechanism for the left over bytes. [Allotrope]
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Transfer mode property of a dataset. [Allotrope]
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HDF datatype class. [Allotrope]
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Fill value is undefined. [Allotrope]
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Fill value is defined by the application. [Allotrope]
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A sequence of an existing datatype (atomic, variable-length (VL), or compound) which are not fixed in length form one dataset location to another. [Allotrope]
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The region of a dataset that has ever been written to. This typically only encompasses the maximum index in the dimensions, exact tracking is impossible in current HDF because empty positions are indistiguishable from positions with the fill value. [Allotrope]
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The region of a dataset that has ever been written to. This typically only encompasses the maximum index in the dimensions, exact tracking is impossible in current HDF because empty positions are indistinguishable from positions with the fill value. [Allotrope]
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synonyms: exclusive or
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synonyms: exclusive or selection
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