@prefix : <http://purl.allotrope.org/voc/afo/WD/2020/12/afo#> .
@prefix cl: <http://purl.obolibrary.org/obo/CL> .
@prefix go: <http://purl.obolibrary.org/obo/GO> .
@prefix ro: <http://purl.obolibrary.org/obo/RO> .
@prefix bfo: <http://purl.obolibrary.org/obo/BFO> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix iao: <http://purl.obolibrary.org/obo/IAO> .
@prefix obi: <http://purl.obolibrary.org/obo/OBI> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix xml: <http://www.w3.org/XML/1998/namespace> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix af-c: <http://purl.allotrope.org/ontologies/common#> .
@prefix af-e: <http://purl.allotrope.org/ontologies/equipment#> .
@prefix af-m: <http://purl.allotrope.org/ontologies/material#> .
@prefix af-p: <http://purl.allotrope.org/ontologies/process#> .
@prefix af-q: <http://purl.allotrope.org/ontologies/quality#> .
@prefix af-r: <http://purl.allotrope.org/ontologies/result#> .
@prefix af-x: <http://purl.allotrope.org/ontologies/property#> .
@prefix chmo: <http://purl.obolibrary.org/obo/CHMO> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix pato: <http://purl.obolibrary.org/obo/PATO> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix af-cur: <http://purl.allotrope.org/ontologies/curation#> .
@base <http://purl.allotrope.org/voc/afo/WD/2020/12/afo#> .

<http://purl.allotrope.org/voc/afo/domain/REC/2026/06/multi-analyte-profiling> rdf:type owl:Ontology ;
                                                                                          owl:versionIRI <http://purl.allotrope.org/voc/afo/domain/REC/2026/06/multi-analyte-profiling> ;
                                                                                          owl:imports <http://purl.allotrope.org/voc/afo/REC/2026/06/afo> ;
                                                                                          dct:contributor <http://www.allotrope.org> ;
                                                                                          dct:issued "2026-07-08T12:00:00Z"^^xsd:dateTime ;
                                                                                          dct:license <http://purl.allotrope.org/voc/creative-commons-attribution-license> ;
                                                                                          dct:modified "2026-03-30T12:00:00Z"^^xsd:dateTime ;
                                                                                          dct:publisher <http://www.allotrope.org> ;
                                                                                          dct:rights <http://purl.allotrope.org/voc/attribution> ,
                                                                                                     <http://purl.allotrope.org/voc/copyright> ;
                                                                                          dct:rightsHolder <http://www.allotrope.org> ;
                                                                                          dct:title "AFO Multi Analyte Profiling Domain Ontology (REC/2026/06)" ;
                                                                                          owl:versionInfo "REC/2026/06" .

#################################################################
#    Annotation properties
#################################################################

###  http://purl.allotrope.org/ontologies/property#AFX_0002796
af-x:AFX_0002796 rdf:type owl:AnnotationProperty .


###  http://purl.allotrope.org/ontologies/property#AFX_0002798
af-x:AFX_0002798 rdf:type owl:AnnotationProperty .


###  http://purl.allotrope.org/ontologies/property#AFX_0002809
af-x:AFX_0002809 rdf:type owl:AnnotationProperty .


###  http://purl.org/dc/terms/source
dct:source rdf:type owl:AnnotationProperty .


###  http://purl.org/pav/importedFrom
<http://purl.org/pav/importedFrom> rdf:type owl:AnnotationProperty .


###  http://www.w3.org/2004/02/skos/core#altLabel
skos:altLabel rdf:type owl:AnnotationProperty .


###  http://www.w3.org/2004/02/skos/core#changeNote
skos:changeNote rdf:type owl:AnnotationProperty .


###  http://www.w3.org/2004/02/skos/core#definition
skos:definition rdf:type owl:AnnotationProperty .


###  http://www.w3.org/2004/02/skos/core#example
skos:example rdf:type owl:AnnotationProperty .


###  http://www.w3.org/2004/02/skos/core#note
skos:note rdf:type owl:AnnotationProperty .


###  http://www.w3.org/2004/02/skos/core#prefLabel
skos:prefLabel rdf:type owl:AnnotationProperty .


###  http://www.w3.org/2004/02/skos/core#scopeNote
skos:scopeNote rdf:type owl:AnnotationProperty .


#################################################################
#    Classes
#################################################################

###  http://purl.allotrope.org/ontologies/process#AFP_0003843
af-p:AFP_0003843 rdf:type owl:Class ;
                 rdfs:subClassOf af-p:AFP_0001116 ;
                 skos:definition "A multi analyte profiling is a biological measurement method to quantify multiple analytes from a sample using beads coated with antibodies or primers targeted at specific analytes. After conjugation of the captured analyte to the bead, the beads are differentiated by their size and their spectral signature, allowing quantitation of analyte concentration in the sample. [Allotrope, NCI]" ;
                 skos:prefLabel "multi analyte profiling" .


###  http://purl.allotrope.org/ontologies/result#AFR_0002941
af-r:AFR_0002941 rdf:type owl:Class ;
                 rdfs:subClassOf af-c:AFC_0000160 ,
                                 iao:_0000310 ,
                                 [ rdf:type owl:Restriction ;
                                   owl:onProperty ro:_0002351 ;
                                   owl:someValuesFrom af-r:AFR_0002942
                                 ] ;
                 skos:definition "A multi analyte profiling aggregate document is a document that aggregates multi analyte profiling documents. [Allotrope]" ;
                 skos:prefLabel "multi analyte profiling aggregate document" .


###  http://purl.allotrope.org/ontologies/result#AFR_0002942
af-r:AFR_0002942 rdf:type owl:Class ;
                 rdfs:subClassOf iao:_0000310 ,
                                 [ rdf:type owl:Restriction ;
                                   owl:onProperty iao:_0000136 ;
                                   owl:someValuesFrom af-p:AFP_0003843
                                 ] ;
                 skos:definition "A multi analyte profiling document is a document that encompasses the information associated with some multi analyte profiling run. [Allotrope]" ;
                 skos:prefLabel "multi analyte profiling document" .


###  http://purl.allotrope.org/ontologies/result#AFR_0002943
af-r:AFR_0002943 rdf:type owl:Class ;
                 rdfs:subClassOf af-r:AFR_0001243 ;
                 skos:definition "A minimum assay bead count threshold setting is a control setting that specifies the threshold value for assay bead counts to be reported. [Allotrope]" ;
                 skos:prefLabel "minimum assay bead count threshold setting" .


###  http://purl.allotrope.org/ontologies/result#AFR_0002944
af-r:AFR_0002944 rdf:type owl:Class ;
                 rdfs:subClassOf af-r:AFR_0000984 ;
                 skos:definition "An assay bead count is a count of the number of assay beads. [Allotrope]" ;
                 skos:prefLabel "assay bead count" .


###  http://purl.allotrope.org/ontologies/result#AFR_0002945
af-r:AFR_0002945 rdf:type owl:Class ;
                 rdfs:subClassOf af-r:AFR_0000917 ;
                 skos:definition "An assay bead identifier is an identifier that identifies some assay bead or beads. [Allotrope]" ;
                 skos:prefLabel "assay bead identifier" .


#################################################################
#    Individuals
#################################################################

###  http://www.allotrope.org
<http://www.allotrope.org> rdf:type owl:NamedIndividual ,
                                    foaf:Organization ;
                           foaf:name "Allotrope Foundation" .


###  http://purl.allotrope.org/voc/attribution
<http://purl.allotrope.org/voc/attribution> rdf:type owl:NamedIndividual ,
                                                     dct:RightsStatement ;
                                            dct:description """
These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations.  By using these taxonomies, you agree to the following terms and conditions applicable to its contents:
******************************************************************************
Copyright Notice and Terms for IUPAC Gold Book
______________________________________________________________________________
Copyright © 1998, Regents of the University of California
All rights reserved.
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS \"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
******************************************************************************
Copyright Notice and Terms for PSI-MS (Proteomics Standards Initiative - Mass Spectrometry) Mass spectrometer output files and spectra interpretation
_____________________________________________________________________________
Created by Matt Chambers, Andreas Bertsch, Marius Kallhardt, Eric Deutsch Fredrik Levander, Pierre-Alain Binz, and Gerhard Mayer. Publisher: HUPO Proteomics Standards Initiative Mass Spectrometry Standards Working Group and HUPO Proteomics Standards Initiative Proteomics Informatics Working Group. This work is used pursuant to a Creative Commons license available here: http://creativecommons.org/licenses/by/3.0/legalcode

******************************************************************************
Attribution Notice for National Center for Biomedical Ontology materials.

This work contains material from the Cell Ontology and Clinical Measurement Ontology, available here: http://bioportal.bioontology.org/.
******************************************************************************
Attribution Notice for ChEBI
This work contains material from the European Bioinformatics Institute’s ChEBI database.
******************************************************************************
Attribution Notice for Quantities Units Dimensions Data Types (http://www.qudt.org/)
This work contains content from www.qudt.org and is used pursuant to a Creative Commons License available here: http://creativecommons.org/licenses/by-sa/3.0/us/legalcode. The original work may have been modified.
******************************************************************************
Copyright and Attribution Notice for Dublin Core Metadata Initiative Document
This work contains material from the following DCMI document used pursuant to a creative commons license available here: https://creativecommons.org/licenses/by/4.0/legalcode. This material may have been modified or changed.
Timestamped URL:          http://dublincore.org/documents/2012/06/14/dcmi-terms/
Date Issued:                       2012-06-14
Document Status:            This is a DCMI Recommendation.
Copyright © 1995-2015 DCMI. All Rights Reserved. DCMI liability, trademark/service mark, document use and software licensing rules apply.
******************************************************************************

""" ;
                                            dct:title "Derivative works attribution" .


###  http://purl.allotrope.org/voc/copyright
<http://purl.allotrope.org/voc/copyright> rdf:type owl:NamedIndividual ,
                                                   dct:RightsStatement ;
                                          dct:description "Copyright © 2015-2026 Allotrope Foundation" ;
                                          dct:rightsHolder <http://www.allotrope.org> ;
                                          dct:title "Copyright © 2015-2026 Allotrope Foundation" .


###  http://purl.allotrope.org/voc/creative-commons-attribution-license
<http://purl.allotrope.org/voc/creative-commons-attribution-license> rdf:type owl:NamedIndividual ,
                                                                              dct:LicenseDocument ;
                                                                     dct:description """This work is licensed under a Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/.

THESE MATERIALS ARE PROVIDED \"AS IS\" AND ALLOTROPE EXPRESSLY DISCLAIMS ALL WARRANTIES, EXPRESS, IMPLIED OR STATUTORY, INCLUDING, WITHOUT LIMITATION, THE WARRANTIES OF NON-INFRINGEMENT, TITLE, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.

Copyright © 2015-2026 Allotrope Foundation
""" ;
                                                                     dct:title "Creative Commons Attribution 4.0 International Public License" .


###  Generated by the OWL API (version 5.5.1) https://github.com/owlcs/owlapi/
