@prefix dct: .
@prefix owl: .
@prefix rdf: .
@prefix xml: .
@prefix xsd: .
@prefix af-c: .
@prefix af-e: .
@prefix af-m: .
@prefix af-p: .
@prefix af-q: .
@prefix af-r: .
@prefix af-x: .
@prefix rdfs: .
@prefix skos: .
@prefix af-cur: .
@base .
rdf:type owl:Ontology ;
owl:versionIRI ;
owl:imports ,
,
;
dct:title "AFO CE-MS Domain Ontology (WD/2019/12)" ;
dct:rights ;
owl:priorVersion ;
dct:modified "2019-12-05T14:15:00Z"^^xsd:dateTime ;
dct:rights ;
dct:license ;
dct:issued "2019-12-30T12:00:00Z"^^xsd:dateTime ;
owl:versionInfo "WD/2019/12" .
#################################################################
#
# Annotation properties
#
#################################################################
### http://purl.allotrope.org/ontologies/property#AFX_0002796
af-x:AFX_0002796 rdf:type owl:AnnotationProperty .
### http://purl.allotrope.org/ontologies/property#AFX_0002798
af-x:AFX_0002798 rdf:type owl:AnnotationProperty .
### http://purl.allotrope.org/ontologies/property#AFX_0002809
af-x:AFX_0002809 rdf:type owl:AnnotationProperty .
### http://purl.org/dc/terms/source
dct:source rdf:type owl:AnnotationProperty .
### http://www.w3.org/2004/02/skos/core#altLabel
skos:altLabel rdf:type owl:AnnotationProperty .
### http://www.w3.org/2004/02/skos/core#changeNote
skos:changeNote rdf:type owl:AnnotationProperty .
### http://www.w3.org/2004/02/skos/core#definition
skos:definition rdf:type owl:AnnotationProperty .
### http://www.w3.org/2004/02/skos/core#example
skos:example rdf:type owl:AnnotationProperty .
### http://www.w3.org/2004/02/skos/core#note
skos:note rdf:type owl:AnnotationProperty .
### http://www.w3.org/2004/02/skos/core#prefLabel
skos:prefLabel rdf:type owl:AnnotationProperty .
### http://www.w3.org/2004/02/skos/core#scopeNote
skos:scopeNote rdf:type owl:AnnotationProperty .
#################################################################
#
# Classes
#
#################################################################
### http://purl.allotrope.org/ontologies/equipment#AFE_0000998
af-e:AFE_0000998 rdf:type owl:Class ;
rdfs:subClassOf af-e:AFE_0000022 ;
skos:changeNote "2016-02-02 add harmonized property restrictions [OSTHUS]" ;
skos:definition "Capillary electrophoresis to electrospray ionization interface that uses a coaxial flow of make-up liquid that is introduced through a tube that is concentric with the separation capillary. [IUPAC MS REC]" ;
skos:prefLabel "sheath flow interface" .
### http://purl.allotrope.org/ontologies/equipment#AFE_0000999
af-e:AFE_0000999 rdf:type owl:Class ;
rdfs:subClassOf af-e:AFE_0000771 ;
skos:definition "Means of coupling capillary electrophoresis to a mass spectrometer in which a liquid reservoir surrounds the separation capillary and transfer capillary to the mass spectrometer and provides electric contact for the capillary electrophoresis. [IUPAC MS REC]" ;
skos:prefLabel "liquid junction interface" .
### http://purl.allotrope.org/ontologies/result#AFR_0000560
af-r:AFR_0000560 rdf:type owl:Class ;
rdfs:subClassOf af-r:AFR_0000133 ,
af-r:AFR_0000561 ;
skos:altLabel "extracted ion electrophorogram" ;
skos:definition "Electropherogram created by plotting the intensity of the signal observed at a chosen m/z value or set of values in a series of mass spectra recorded as a function of electrophoresis time. [IUPAC MS REC]" ;
skos:prefLabel "extracted ion electropherogram" .
### http://purl.allotrope.org/ontologies/result#AFR_0000579
af-r:AFR_0000579 rdf:type owl:Class ;
rdfs:subClassOf af-r:AFR_0000133 ,
af-r:AFR_0000580 ;
skos:altLabel "total ion current electrophorogram" ;
skos:definition "Plot of the total ion current in each of a series of mass spectra that are recorded as a function of electrophoresis time. [IUPAC MS REC]" ;
skos:prefLabel "total ion current electropherogram" .
#################################################################
#
# Individuals
#
#################################################################
### http://purl.allotrope.org/voc/attribution
rdf:type owl:NamedIndividual ,
dct:RightsStatement ;
dct:description """
These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations. By using these taxonomies, you agree to the following terms and conditions applicable to its contents:
******************************************************************************
Copyright Notice and Terms for IUPAC Gold Book
______________________________________________________________________________
Copyright © 1998, Regents of the University of California
All rights reserved.
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS \"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
******************************************************************************
Copyright Notice and Terms for PSI-MS (Proteomics Standards Initiative - Mass Spectrometry) Mass spectrometer output files and spectra interpretation
_____________________________________________________________________________
Created by Matt Chambers, Andreas Bertsch, Marius Kallhardt, Eric Deutsch Fredrik Levander, Pierre-Alain Binz, and Gerhard Mayer. Publisher: HUPO Proteomics Standards Initiative Mass Spectrometry Standards Working Group and HUPO Proteomics Standards Initiative Proteomics Informatics Working Group. This work is used pursuant to a Creative Commons license available here: http://creativecommons.org/licenses/by/3.0/legalcode
******************************************************************************
Attribution Notice for National Center for Biomedical Ontology materials.
This work contains material from the Cell Ontology and Clinical Measurement Ontology, available here: http://bioportal.bioontology.org/.
******************************************************************************
Attribution Notice for ChEBI
This work contains material from the European Bioinformatics Institute’s ChEBI database.
******************************************************************************
Attribution Notice for Quantities Units Dimensions Data Types (http://www.qudt.org/)
This work contains content from www.qudt.org and is used pursuant to a Creative Commons License available here: http://creativecommons.org/licenses/by-sa/3.0/us/legalcode. The original work may have been modified.
******************************************************************************
Copyright and Attribution Notice for Dublin Core Metadata Initiative Document
This work contains material from the following DCMI document used pursuant to a creative commons license available here: https://creativecommons.org/licenses/by/4.0/legalcode. This material may have been modified or changed.
Timestamped URL: http://dublincore.org/documents/2012/06/14/dcmi-terms/
Date Issued: 2012-06-14
Document Status: This is a DCMI Recommendation.
Copyright © 1995-2015 DCMI. All Rights Reserved. DCMI liability, trademark/service mark, document use and software licensing rules apply.
******************************************************************************
""" ;
dct:title "Derivative works attribution" .
### http://purl.allotrope.org/voc/copyright
rdf:type owl:NamedIndividual ,
dct:RightsStatement ;
dct:description "Copyright © 2019 Allotrope Foundation" ;
dct:rightsHolder ;
dct:title "Copyright © 2019 Allotrope Foundation" .
### http://purl.allotrope.org/voc/creative-commons-attribution-license
rdf:type owl:NamedIndividual ,
dct:LicenseDocument ;
dct:description """This work is licensed under a Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/.
THESE MATERIALS ARE PROVIDED \"AS IS\" AND ALLOTROPE EXPRESSLY DISCLAIMS ALL WARRANTIES, EXPRESS, IMPLIED OR STATUTORY, INCLUDING, WITHOUT LIMITATION, THE WARRANTIES OF NON-INFRINGEMENT, TITLE, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
Copyright © 2015-2019 Allotrope Foundation
""" ;
dct:title "Creative Commons Attribution 4.0 International Public License" .
### Generated by the OWL API (version 4.1.3) https://github.com/owlcs/owlapi