@prefix cl: . @prefix go: . @prefix ro: . @prefix bfo: . @prefix dct: . @prefix iao: . @prefix obi: . @prefix owl: . @prefix rdf: . @prefix xml: . @prefix xsd: . @prefix af-c: . @prefix af-e: . @prefix af-m: . @prefix af-p: . @prefix af-q: . @prefix af-r: . @prefix af-x: . @prefix rdfs: . @prefix skos: . @prefix af-cur: . @base . rdf:type owl:Ontology ; owl:versionIRI ; owl:imports , ; dct:rights ; dct:modified "2018-04-12T12:00:00Z"^^xsd:dateTime ; dct:title "AFO Gas Chromatography Domain Ontology - working draft" ; dct:rights ; dct:license ; dct:issued "2017-11-24T04:10:00Z"^^xsd:dateTime ; owl:versionInfo "WD/2018/04" ; owl:priorVersion . ################################################################# # # Annotation properties # ################################################################# ### http://purl.allotrope.org/ontologies/property#AFX_0002796 af-x:AFX_0002796 rdf:type owl:AnnotationProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0002798 af-x:AFX_0002798 rdf:type owl:AnnotationProperty . ### http://purl.allotrope.org/ontologies/property#AFX_0002809 af-x:AFX_0002809 rdf:type owl:AnnotationProperty . ### http://purl.org/dc/terms/source dct:source rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#altLabel skos:altLabel rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#changeNote skos:changeNote rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#definition skos:definition rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#example skos:example rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#note skos:note rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#prefLabel skos:prefLabel rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#scopeNote skos:scopeNote rdf:type owl:AnnotationProperty . ################################################################# # # Object Properties # ################################################################# ### http://purl.obolibrary.org/obo/RO_0000056 ro:_0000056 rdf:type owl:ObjectProperty . ################################################################# # # Classes # ################################################################# ### http://purl.allotrope.org/ontologies/equipment#AFE_0000161 af-e:AFE_0000161 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000462 ; dct:source "K. Grob, Split and Splitless Injection for Quantitative Gas Chromatography: Concepts, Processes, Practical Guidelines, Sources of Error, 4th, Completely Revised Edition (Wiley, Hoboken, New Jersey, 2001)." ; skos:altLabel "GC inlet" , "column injector" , "column inlet" ; skos:definition "An inlet into a gas chromatograph. [Allotrope]" ; skos:prefLabel "gas chromatograph inlet" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000526 af-e:AFE_0000526 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000718 ; af-x:AFX_0002798 "true"^^xsd:boolean ; skos:definition "The inlet liner is a tube that allows a sample which is injected in the liquid phase to pass into the gaseous phase and onto the column. [Allotrope]" ; skos:prefLabel "inlet liner" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000543 af-e:AFE_0000543 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000771 ; skos:definition "A liner is a piece of glass tube used in the inlet of S/SL GC injectors. [Allotrope]" ; skos:prefLabel "liner" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000591 af-e:AFE_0000591 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000024 ; af-x:AFX_0002798 "true"^^xsd:boolean ; skos:altLabel "2D GC" , "2D gas chromatograph" , "GCxGC" , "two-dimensional gas chromatograph" ; skos:changeNote "2016-02-02 add harmonized property restrictions [Allotrope]" ; skos:definition "In GC × GC two columns are connected sequentially, typically the first dimension is a conventional column and the second dimension is a short fast GC type, with a modulator positioned between them. [Wikipedia]" ; skos:prefLabel "two-dimensional gas chromatography system" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000671 af-e:AFE_0000671 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000161 ; skos:altLabel "PTV injector" ; skos:definition "Temperature controlled sample introduction inlet. [Allotrope]" ; skos:prefLabel "PTV inlet" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000755 af-e:AFE_0000755 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000161 ; skos:altLabel "SL" , "splitless" , "splitless injector" ; skos:definition "An GC injector type enabling the carrier gas to sweep the volatilized sample onto the GC column. [Allotrope]" ; skos:prefLabel "splitless inlet" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000771 af-e:AFE_0000771 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000772 af-e:AFE_0000772 rdf:type owl:Class ; owl:equivalentClass [ owl:intersectionOf ( af-e:AFE_0000217 [ rdf:type owl:Restriction ; owl:onProperty ro:_0000056 ; owl:someValuesFrom af-p:AFP_0000310 ] ) ; rdf:type owl:Class ] ; af-x:AFX_0002798 "true"^^xsd:boolean ; skos:changeNote "2016-02-02 add harmonized property restrictions [Allotrope]" ; skos:definition "A chromatography column used for gas chromatography. [Allotrope]" ; skos:prefLabel "gas chromatography column" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000787 af-e:AFE_0000787 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000161 ; skos:altLabel "cool on column" , "on-column injector" ; skos:definition "The sample is introduced directly into the column without prior heating in the inlet. [Allotrope]" ; skos:prefLabel "on-column inlet" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000811 af-e:AFE_0000811 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000161 ; skos:altLabel "S" , "split" , "split injector" ; skos:definition "A GC injector type enabling the carrier gas to sweep a part of volatilized sample onto the GC column,with that remaining split/swept to waste. [Allotrope]" ; skos:prefLabel "split inlet" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000835 af-e:AFE_0000835 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000161 ; skos:altLabel "P/T system" ; skos:definition "An inlet whereby the volatiles are first purged from the sample via. a carrier gas, trapped in the inlet headspace, condensed and adsorbed at lower temperatures prior to being introduced onto the GC column. [Allotrope]" ; skos:prefLabel "purge and trap system" . ### http://purl.allotrope.org/ontologies/equipment#AFE_0000885 af-e:AFE_0000885 rdf:type owl:Class ; rdfs:subClassOf af-e:AFE_0000161 ; skos:definition "An open split inlet splits the gas flow to two different outlets with one being an open system at atmospheric pressure. [Allotrope]" ; skos:prefLabel "open split inlet" . ### http://purl.allotrope.org/ontologies/material#AFM_0000417 af-m:AFM_0000417 rdf:type owl:Class . ### http://purl.allotrope.org/ontologies/material#AFM_0000422 af-m:AFM_0000422 rdf:type owl:Class ; rdfs:subClassOf af-m:AFM_0000417 ; af-x:AFX_0002796 af-cur:AFCUR_0000003 ; skos:definition "Compound added in a fixed reproducible amount to a solution to be analyzed by gas chromatography to permit corrections for uncontrolled variations in injected volumes. [IUPAC MS REC]" ; skos:prefLabel "volumetric internal standard" . ### http://purl.allotrope.org/ontologies/process#AFP_0000534 af-p:AFP_0000534 rdf:type owl:Class ; rdfs:subClassOf af-p:AFP_0000422 ; skos:altLabel "MESI-GC" , "membrane extraction with sorbent interface gas chromatography" , "membrane extraction with sorbent interface-gas chromatography" ; skos:definition "A separation method where the sample is first transferred from one phase (the 'donor' or 'feed' phase) to another (the 'acceptor' or 'strip' phase) across a non-porous non-polar polymer membrane. The membrane extracts the analytes from their matrix, and these are subsequently trapped on a polymeric trap with a porous sorbent using a carrier gas stream. In the second step, the mixture in the carrier gas stream is further separated by gas chromatography. [CHMO]" ; skos:prefLabel "membrane extraction with a sorbent interface-gas chromatography" . ### http://purl.allotrope.org/ontologies/process#AFP_0000652 af-p:AFP_0000652 rdf:type owl:Class ; rdfs:subClassOf af-p:AFP_0000310 ; skos:altLabel "GLC" , "gas-liquid chromatography" ; skos:definition "Gas chromatography where the stationary phase is a liquid. [CHMO]" ; skos:prefLabel "gas-liquid chromatography" . ### http://purl.allotrope.org/ontologies/process#AFP_0000716 af-p:AFP_0000716 rdf:type owl:Class ; rdfs:subClassOf af-p:AFP_0000310 ; skos:altLabel "Py-GC" , "py-GC" , "pyrolysis GC" , "pyrolysis-GC" , "pyrolysis-gas chromatography" ; skos:definition "The chemical degradation of a sample by thermal energy where the volatile pyrolysates are then separated by column chromatography where the mobile phase is a gas. [CHMO]" ; skos:prefLabel "pyrolysis gas chromatography" . ### http://purl.allotrope.org/ontologies/process#AFP_0001541 af-p:AFP_0001541 rdf:type owl:Class ; rdfs:subClassOf af-p:AFP_0000310 ; skos:altLabel "2D GC" , "2D gas chromatography" , "GCxGC" ; skos:changeNote "2016-02-02 add harmonized property restrictions [Allotrope]" ; skos:definition "In GC × GC two columns are connected sequentially, typically the first dimension is a conventional column and the second dimension is a short fast GC type, with a modulator positioned between them. [Wikipedia]" ; skos:prefLabel "two-dimensional gas chromatography" . ### http://purl.allotrope.org/ontologies/process#AFP_0001847 af-p:AFP_0001847 rdf:type owl:Class ; rdfs:subClassOf af-p:AFP_0000310 ; skos:altLabel "CSP GC" , "CSP-GC" , "GC on a chiral stationary phase" , "chiral GC" ; skos:definition "Column chromatography where the mobile phase is a gas and the stationary phase is a chiral, high-boiling-point, thermally-stable liquid such as a chiral polysiloxane. [CHMO]" ; skos:prefLabel "chiral stationary phase gas chromatography" . ### http://purl.allotrope.org/ontologies/process#AFP_0001923 af-p:AFP_0001923 rdf:type owl:Class ; rdfs:subClassOf af-p:AFP_0000310 ; skos:altLabel "GSC" ; skos:definition "Gas chromatography where the stationary phase is a solid. [CHMO]" ; skos:prefLabel "gas-solid chromatography" . ### http://purl.allotrope.org/ontologies/process#AFP_0002147 af-p:AFP_0002147 rdf:type owl:Class ; rdfs:subClassOf af-p:AFP_0001159 ; skos:altLabel "PTV" , "programmed-temperature vaporisation"@en-gb , "programmed-temperature vaporization" ; skos:definition "A sample preparation method for gas chromatography in which the sample is deposited into the inlet of the chromatograph at a low temperature, then the inlet temperature is rapidly raised to vaporise the desired components and cause their transfer onto the column. [CHMO]" ; skos:prefLabel "programmed temperature vaporisation"@en-gb , "programmed temperature vaporization" . ### http://purl.allotrope.org/ontologies/process#AFP_0002444 af-p:AFP_0002444 rdf:type owl:Class ; rdfs:subClassOf af-p:AFP_0000310 ; skos:altLabel "IGC" ; skos:definition "A surface characterization technique in which a pulse or constant concentration of a known gas or vapour (probe molecule) is injected into a column packed with the solid sample at a fixed carrier gas flow rate. The retention time of the probe molecule is then measured using a traditional gas chromatography detector. [CHMO]" ; skos:prefLabel "inverse gas chromatography" . ### http://purl.allotrope.org/ontologies/result#AFR_0000314 af-r:AFR_0000314 rdf:type owl:Class ; rdfs:subClassOf af-r:AFR_0000523 ; skos:definition "Result of a gas chromatography run. [Allotrope]" ; skos:prefLabel "gas chromatography result" . ### http://purl.allotrope.org/ontologies/result#AFR_0000523 af-r:AFR_0000523 rdf:type owl:Class . ################################################################# # # Individuals # ################################################################# ### http://purl.allotrope.org/voc/attribution rdf:type owl:NamedIndividual , dct:RightsStatement ; dct:description """ These taxonomies contain material or may constitute derivative works of material which may be subject to copyright by one of the following organizations. By using these taxonomies, you agree to the following terms and conditions applicable to its contents: ****************************************************************************** Copyright Notice and Terms for IUPAC Gold Book ______________________________________________________________________________ Copyright © 1998, Regents of the University of California All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS \"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. 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Publisher: HUPO Proteomics Standards Initiative Mass Spectrometry Standards Working Group and HUPO Proteomics Standards Initiative Proteomics Informatics Working Group. This work is used pursuant to a Creative Commons license available here: http://creativecommons.org/licenses/by/3.0/legalcode ****************************************************************************** Attribution Notice for National Center for Biomedical Ontology materials. 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Copyright © 2015-2018 Allotrope Foundation """ ; dct:title "Creative Commons Attribution 4.0 International Public License" . ### http://purl.allotrope.org/voc/afo/domain/WD/2018/04/gc rdf:type owl:NamedIndividual ; dct:rightsHolder . ### Generated by the OWL API (version 4.1.3) https://github.com/owlcs/owlapi